MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,288
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,362
Total number of protein coding genes annotated/found:
2,288
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000027.1
SEQF5007_00129
Genome Viewer
NA
AA
1041/347
43-1083
Cysteine desulfurase
SEQF5007|JADGMA010000027.1
SEQF5007_00130
Genome Viewer
NA
AA
678/226
1087-1764
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00131
Genome Viewer
NA
AA
384/128
1777-2160
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00132
Genome Viewer
NA
AA
891/297
2160-3050
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00133
Genome Viewer
NA
AA
411/137
3053-3463
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00134
Genome Viewer
NA
AA
747/249
3467-4213
Pyrimidine 5'-nucleotidase YjjG
SEQF5007|JADGMA010000027.1
SEQF5007_00135
Genome Viewer
NA
AA
297/99
4626-4922
30S ribosomal protein S6
SEQF5007|JADGMA010000027.1
SEQF5007_00136
Genome Viewer
NA
AA
510/170
4944-5453
Single-stranded DNA-binding protein A
SEQF5007|JADGMA010000027.1
SEQF5007_00137
Genome Viewer
NA
AA
243/81
5500-5742
30S ribosomal protein S18
SEQF5007|JADGMA010000027.1
SEQF5007_00138
Genome Viewer
NA
AA
255/85
6071-6325
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00139
Genome Viewer
NA
AA
573/191
6453-7025
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00140
Genome Viewer
NA
AA
354/118
7109-7462
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00141
Genome Viewer
NA
AA
258/86
7790-7533
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00142
Genome Viewer
NA
AA
750/250
7947-8696
4-sulfomuconolactone hydrolase
SEQF5007|JADGMA010000027.1
SEQF5007_00143
Genome Viewer
NA
AA
261/87
8960-8700
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00144
Genome Viewer
NA
AA
255/85
9262-9516
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00145
Genome Viewer
NA
AA
855/285
9679-10533
hypothetical protein
SEQF5007|JADGMA010000027.1
SEQF5007_00146
Genome Viewer
NA
AA
633/211
10874-11506
Leucine efflux protein
SEQF5007|JADGMA010000027.1
SEQF5007_00147
Genome Viewer
NA
AA
579/193
11534-12112
Adenosylcobalamin/alpha-ribazole phosphatase
SEQF5007|JADGMA010000027.1
SEQF5007_00148
Genome Viewer
NA
AA
378/126
12597-12220
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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